DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and mnx1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002935225.2 Gene:mnx1 / 100496534 XenbaseID:XB-GENE-919890 Length:338 Species:Xenopus tropicalis


Alignment Length:304 Identity:73/304 - (24%)
Similarity:108/304 - (35%) Gaps:93/304 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 PQSQTQKLKNGDFATPP-----------------PTTPTSLPPLEGISTPPQS----PGEKSSSA 219
            |...|..|:. |..:||                 |....:|.|......|||:    |....|:|
 Frog    43 PSEHTDSLRT-DTPSPPRTCGLVPKPGFLSSHQHPINMMALHPQAAPGIPPQALYGHPMYSYSAA 106

  Fly   220 VS----------------QEINH---------------------RIVTA----PNGAGDFNWSHI 243
            .:                |..:|                     |..||    |..| ||| |..
 Frog   107 AALAAGQHPALSYPYPQMQGAHHAHHPVDPIKISAGTFQLDQWLRASTAGMMLPKMA-DFN-SQA 169

  Fly   244 EETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMK 308
            :..|...|   :|.|..:|..|.||||.:|..|:|::|.:|.::|.:|.|:|.|:||||||||||
 Frog   170 QSNLLGKC---RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 231

  Fly   309 SKKDRTLD-------SSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHS 366
            .|:.:...       ...:..|.|......|.|......:         ||.|  ....|...:|
 Frog   232 WKRSKKAKEQAVQDAEKQQRAGKGSCEEKCPEELQEDKNS---------YHLH--PRGDPIKGNS 285

  Fly   367 HSHGYGLLNDYPQQQTHQQYDAYPQQYQHQCSYQQHPQDLYHLS 410
            .     |:.||  ..:.::.|...::.:.:....:..:..||.|
 Frog   286 R-----LVRDY--SDSEEEEDEEDREEEEEEEGHREEKRFYHHS 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 26/133 (20%)
Homeodomain 255..311 CDD:459649 28/55 (51%)
KLF1_2_4_N <321..404 CDD:425360 13/82 (16%)
mnx1XP_002935225.2 Homeodomain 178..234 CDD:459649 28/55 (51%)

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