DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and ventx2.2

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002937178.3 Gene:ventx2.2 / 100494704 XenbaseID:XB-GENE-920515 Length:333 Species:Xenopus tropicalis


Alignment Length:350 Identity:89/350 - (25%)
Similarity:118/350 - (33%) Gaps:107/350 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TTVEQVKKA------PAVSTKVTASPAPSY-DQEYVTVPTPSA---SEDVDYLD----------- 172
            ||..::.||      .|.|::.:....||. ||.|...|:||.   :.||....           
 Frog     5 TTTGKMTKAFSSVEWLAQSSRRSHKEQPSKGDQRYSPYPSPSLPSWNSDVSPSSWNSQLSPVAGS 69

  Fly   173 ----------VYSPQSQTQKLKNGD---FATPPPTTPTSLPPLEG--------------ISTPPQ 210
                      .||..|::....|.|   |......|| |.|...|              :|.|..
 Frog    70 AQVSPCPGSAQYSSDSESSLYSNEDEDLFCEKDLNTP-STPGDNGLLHKDTATHDYSGMVSVPAN 133

  Fly   211 SPGEKSS-------------SAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYT 262
            :|...|:             |....|.:....|||.|....:.|. .:|...:.|..:|.|..:|
 Frog   134 TPRTTSNEDAAKSGYSTSTDSGYESEASRSSSTAPEGDATVSLSP-NDTSDEEGKLGRRLRTAFT 197

  Fly   263 RYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPE--HCGAG 325
            ..|...|||.|..:||:....|..:|..|.|||.|||.||||||||.|:: ..|..|:  |    
 Frog   198 SDQISTLEKTFQKHRYLGASERRKLAAKLQLSEVQIKTWFQNRRMKYKRE-IQDGRPDSYH---- 257

  Fly   326 YTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYS-------------------HSHSHGY 371
                    .|......|....|.|:: .|.....||.||                   .|.:|  
 Frog   258 --------PAQFFGVYGYSQQPTPVF-QHAVQQPYPGYSPLMETLPGTMPYAMHPPAMDSRNH-- 311

  Fly   372 GLLNDYPQQQTHQQYDAYPQQYQHQ 396
              .|..|.|..:.     |||:..|
 Frog   312 --FNSTPFQMFYM-----PQQHLGQ 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 39/179 (22%)
Homeodomain 255..311 CDD:459649 27/55 (49%)
KLF1_2_4_N <321..404 CDD:425360 18/94 (19%)
ventx2.2XP_002937178.3 Homeodomain 190..246 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.