DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and barhl1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_004916717.1 Gene:barhl1 / 100491447 XenbaseID:XB-GENE-853661 Length:327 Species:Xenopus tropicalis


Alignment Length:157 Identity:43/157 - (27%)
Similarity:73/157 - (46%) Gaps:15/157 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 EKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRY 278
            :||||:.|.|..::  ......||...|...::.....|..::.|..:|.:|..:||:.|...:|
 Frog   140 DKSSSSTSSESEYK--GKVKEEGDREISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKY 202

  Fly   279 ITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTA---MLP-----PLEA 335
            ::.:.|:::|.:|:|::.|:|.|:||||.|.|:...:..........|:|   |.|     |...
 Frog   203 LSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSL 267

  Fly   336 TSTATTGAPSVPVPMYHHHQTTAAYPA 362
            .|....||     .:|.:...||..||
 Frog   268 VSNLDPGA-----ALYLYRGPTAPPPA 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 9/33 (27%)
Homeodomain 255..311 CDD:459649 19/55 (35%)
KLF1_2_4_N <321..404 CDD:425360 13/50 (26%)
barhl1XP_004916717.1 Homeodomain 179..235 CDD:459649 19/55 (35%)

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