Protein Alignment ftz and hoxc10

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001258236.1
• Gene: hoxc10 / 100487723
• XenbaseID: XB-GENE-486915
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 363
• Identity: 93/363 - (25%)
• Similarity: 139/363 - (38%)
• Gaps: 107/363 - (29%)

  Fly    24 PHSLPPTYY--DNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKA 86
            |:::.|..:  |:...:...:..|..||.|.|.....||....|...|              |..
 Frog     4 PNNVTPNSFLMDSLAGSCRGETYSTNQGMYMQTGSDFSCGMMRNCGIV--------------PSL 54

  Fly    87 TKRKAEDDAASIIAAVEERPSTLRAL-----------LTNPVKKLKYTPDY-----------FYT 129
            :||   ||..:...::...||.|..|           :..||.:...:..:           .|:
 Frog    55 SKR---DDVNNPGLSLNTYPSYLSQLDSWCEPKNTYRIEQPVARQLSSCSFPTNVKEENVCCMYS 116

  Fly   130 TVEQVKKA----------PAVSTKVTASPAPSY---DQEYVTVPTPSASEDVDYLDVYSPQS--- 178
            |.::.|.|          |...:.....|.|||   .|.|....|||.....|:...:..::
 Frog   117 TDKRAKNATEAALYPNQMPETRSSDHEVPVPSYYRASQGYSMEKTPSCHTTGDFETTFENRTSVS 181

  Fly   179 ------------------QTQKLKNGDFATPPPTTPTS--------------LPPLEGISTPPQS 211
                              :..|..|...||...|:..:              |||.||...|.::
 Frog   182 ARSEILEQQQAGGKGGFPENTKTDNQSLATNLTTSSATASDIKTEKSLPAPKLPPSEGDKEPSKN 246

  Fly   212 PG---EKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEF 273
            ..   :.|.:...::|.     |.|.||  ||        ...|..::.|..||::|||||||||
 Frog   247 TDTSTDNSDAEAKEDIK-----AENAAG--NW--------LTAKSGRKKRCPYTKHQTLELEKEF 296

  Fly   274 HFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            .||.|:||.||::|:.:::|::||:||||||||||.||
 Frog   297 LFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKK 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	57/298 (19%)
		Homeodomain	255..311	CDD:459649	33/55 (60%)
		KLF1_2_4_N	<321..404	CDD:425360
hoxc10	NP_001258236.1	Homeodomain	278..334	CDD:459649	33/55 (60%)