Protein Alignment ftz and hoxa6

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: XP_002933441.2
• Gene: hoxa6 / 100485428
• XenbaseID: XB-GENE-481964
• Length: 237
• Species: Xenopus tropicalis
• Alignment Length: 313
• Identity: 97/313 - (30%)
• Similarity: 122/313 - (38%)
• Gaps: 99/313 - (31%)

  Fly    16 MNMY--NMYHPHSLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQ 78
            |:.|  |...|.:||      :|..|:......|...|....:....|           ..||||
 Frog     1 MSSYFVNSTFPGTLP------NGQEAFVGQIPLYSSGYEALRHFPGAY-----------GSPPVQ 48

  Fly    79 PTT-PPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVST 142
            ... |.|                ...::.:||.|...|   ..:|....||:..|.
 Frog    49 DKPYPSP----------------CFYQQSNTLIACNGN---SYEYGASCFYSGKES--------- 85

  Fly   143 KVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLK-NGDFATPPPTTPTSLPPLEGIS 206
              :.||: ||.       |....:..:||...:.|.|.:... .|......||
 Frog    86 --SGSPS-SYG-------TKHRGDSGEYLHFSADQQQYKSASAQGKMLHEEPT------------ 128

  Fly   207 TPPQSPGEKSSSAV---SQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLE 268
                  ..|.||.|   .|.:|       :..|....:|           .:|.||||||:||||
 Frog   129 ------DRKYSSPVYPWMQRVN-------SCTGPVYGAH-----------GRRGRQTYTRFQTLE 169

  Fly   269 LEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEH 321
            ||||||||||:||||||:|||||.|:||||||||||||||.||:..| ..|.|
 Frog   170 LEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESKL-LLPSH 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	45/238 (19%)
		Homeodomain	255..311	CDD:459649	47/55 (85%)
		KLF1_2_4_N	<321..404	CDD:425360	1/1 (100%)
hoxa6	XP_002933441.2	Homeodomain	156..212	CDD:459649	47/55 (85%)