DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and ventx1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001107707.1 Gene:ventx1 / 100101668 XenbaseID:XB-GENE-920501 Length:277 Species:Xenopus tropicalis


Alignment Length:222 Identity:56/222 - (25%)
Similarity:83/222 - (37%) Gaps:66/222 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 PPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEIN--------HRIVTAPNGAG-DFNWSHIEE- 245
            |.|..||....    ..|.:..|::...|.|.:.:        |  .::|:.|. ..||...:| 
 Frog    36 PQPLAPTKYAK----EIPRRKDGQEQGDATSFQSSLGKHGDKLH--YSSPSSAALHRNWGSSDEF 94

  Fly   246 ---------------------TLASDCK------DSKRTRQTYTRYQTLELEKEFHFNRYITRRR 283
                                 ...:||:      |.:|..:|....|...||:.|:..||:....
 Frog    95 SSAGSEDDSTDGFPSPVRNSQETETDCRGKSPKSDLQRRLRTAFTPQISRLEQAFNKQRYLGASE 159

  Fly   284 RIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPP---LEATSTATTGAPS 345
            |..:|.:|.|||.|:|.||||||||.|:.   ....:|      :|:||   ...|.:...|...
 Frog   160 RKKLATSLRLSEIQVKTWFQNRRMKLKRQ---IQDQQH------SMVPPPVCYPQTFSYYPGGLP 215

  Fly   346 VPV-------PMYHHHQTTAAYPAYSH 365
            ||:       |..|..||    |.:|:
 Frog   216 VPLNSGSFFQPPAHPFQT----PQHSY 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 14/87 (16%)
Homeodomain 255..311 CDD:459649 24/55 (44%)
KLF1_2_4_N <321..404 CDD:425360 14/55 (25%)
ventx1NP_001107707.1 Homeodomain 132..187 CDD:459649 24/54 (44%)

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