DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and NKX6-2

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_796374.2 Gene:NKX6-2 / 84504 HGNCID:19321 Length:277 Species:Homo sapiens


Alignment Length:206 Identity:57/206 - (27%)
Similarity:86/206 - (41%) Gaps:44/206 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 SPSSVVESVAR---SLNKGVLGGSLAAAAAAAG-------LNNNHSGSGVSGGPGNVNVPMHSPG 274
            :|.:.:.::|.   ||....|.|.....|.|.|       |...|..|.:.|.      |:.:.|
Human    14 APLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGISDILGR------PVGAAG 72

  Fly   275 GG-------DSDSESDSGNEAGSSQNSGNGKKNP-------PQIY--------PWMKRVHLGTS- 316
            ||       .:...|.:|...|.:.....|...|       |.|:        ||......|.: 
Human    73 GGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAP 137

  Fly   317 ---TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 378
               .::.:|:.|..|.:::..|...|||.|...:||....|..:|::|.:||.|:|:||||||.|
Human   138 AGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 202

  Fly   379 WKKEH--KMAS 387
            |:|.|  :|||
Human   203 WRKRHAVEMAS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 24/55 (44%)
NKX6-2NP_796374.2 Repressor domain. /evidence=ECO:0000250|UniProtKB:D3Z4R4 89..142 9/52 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..155 4/22 (18%)
Homeodomain 147..205 CDD:459649 24/57 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..250 3/4 (75%)

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