Protein Alignment Scr and HB18

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_177248.3
• Gene: HB18 / 843431
• AraportID: AT1G70920
• Length: 206
• Species: Arabidopsis thaliana
• Alignment Length: 120
• Identity: 33/120 - (27%)
• Similarity: 58/120 - (48%)
• Gaps: 10/120 - (8%)

  Fly   266 VNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWM--KRVHLGTSTVNANGETKRQR 328
            :::|..||       ....|:..|......|......:...||  ...|:.....|:.|. :|::
plant    14 ISIPSFSP-------SPSLGDHHGMRDFDINQTPKTEEDREWMIGATPHVNEDDSNSGGR-RRKK 70

  Fly   329 TSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
            ...|:.|:..||:.|..|..||.:::.::|..|.|::||:::||||||.:.|.:|
plant    71 LRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKH 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	20/55 (36%)
HB18	NP_177248.3	HOX	66..122	CDD:197696	20/56 (36%)
		HALZ	124..167	CDD:128634	1/2 (50%)