Protein Alignment Scr and AtHB23

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_564268.1
• Gene: AtHB23 / 839587
• AraportID: AT1G26960
• Length: 255
• Species: Arabidopsis thaliana
• Alignment Length: 151
• Identity: 43/151 - (28%)
• Similarity: 65/151 - (43%)
• Gaps: 36/151 - (23%)

  Fly   251 NNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGT 315
            |||    |::..|.|.::..|       ..|.:...:.....:...||::|      |..|. |.
plant     4 NNN----GLAFFPENFSLQNH-------HQEEEDHPQLLQDFHGFLGKRSP------MNNVQ-GF 50

  Fly   316 STVNANGE-----------TKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 369
            ..::.||:           .|::|.:..  |...|||:|.....|...|::|:|.||.|..|||.
plant    51 CNLDMNGDEEYSDDGSKMGEKKRRLNME--QLKALEKDFELGNKLESDRKLELARALGLQPRQIA 113

  Fly   370 IWFQNRRMKWK-----KEHKM 385
            |||||||.:.|     |::.|
plant   114 IWFQNRRARSKTKQLEKDYDM 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	25/60 (42%)
AtHB23	NP_564268.1	HOX	71..124	CDD:197696	24/54 (44%)
		HALZ	126..167	CDD:460477	2/9 (22%)