Protein Alignment Scr and HB40

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001329011.1
• Gene: HB40 / 829827
• AraportID: AT4G36740
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 102
• Identity: 30/102 - (29%)
• Similarity: 40/102 - (39%)
• Gaps: 27/102 - (26%)

  Fly   303 QIYPWMKRVHLGTSTVNANGETK-----RQRT-----------------SYTRYQTLELEKEFHF 345
            |:||     .:.|..|...||.|     |::|                 ..|..|...||..|..
plant    15 QLYP-----DVYTQIVQPVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGD 74

  Fly   346 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 382
            ...|...|:..:|..|.|..||:.:||||||.:||.:
plant    75 EHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNK 111

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	22/77 (29%)
HB40	NP_001329011.1	HOX	56..109	CDD:197696	18/52 (35%)