Protein Alignment Scr and HB17

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_178252.2
• Gene: HB17 / 814671
• AraportID: AT2G01430
• Length: 275
• Species: Arabidopsis thaliana
• Alignment Length: 197
• Identity: 48/197 - (24%)
• Similarity: 74/197 - (37%)
• Gaps: 69/197 - (35%)

  Fly   195 NSNNNNSQSLA-SPQDLSTRDIS---PKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHS 255
            |.||:..:.:| .|::.|..|::   |..|.|.:                              |
plant    65 NPNNSLIKIMAILPENSSNLDLTISVPGFSSSPL------------------------------S 99

  Fly   256 GSGVSGGPGNVNVPMHS-PGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVN 319
            ..|..||...:.:.|:. |...|.|.|..| ::.||:         ||
plant   100 DEGSGGGRDQLRLDMNRLPSSEDGDDEEFS-HDDGSA---------PP----------------- 137

  Fly   320 ANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK-KEH 383
                  |::...||.|:..||..|..|..|..:::..:|..|.|..|||::||||||.:.| |:.
plant   138 ------RKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQT 196

  Fly   384 KM 385
            :|
plant   197 EM 198

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	22/56 (39%)
HB17	NP_178252.2	HOX	136..192	CDD:197696	23/78 (29%)
		HALZ	194..237	CDD:128634	2/5 (40%)