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Protein Alignment Scr and Hoxa6
DIOPT Version :9
Sequence 1: | NP_001368995.1 |
Gene: | Scr / 40833 |
FlyBaseID: | FBgn0003339 |
Length: | 564 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178016.1 |
Gene: | Hoxa6 / 685732 |
RGDID: | 1590236 |
Length: | 233 |
Species: | Rattus norvegicus |
Alignment Length: | 134 |
Identity: | 74/134 - (55%) |
Similarity: | 93/134 - (69%) |
Gaps: | 11/134 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 255 SGSGVSGGPGNVNVPMH-SPGGGDSDSESDSGNEAGSS-QNSGNGKKNPPQIYPWMKRVHLGTST 317
||:....|||:. :| || :...:.||.:..|.: ...|..:|....:||||:|::.....
Rat 91 SGNSKQRGPGDY---LHFSP---EQQYKPDSSSVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGA 149
Fly 318 V-NANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 381
| .::| :|.|.:||||||||||||||||||||||||||||:||||||||||||||||||||||
Rat 150 VYGSHG--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 212
Fly 382 EHKM 385
|:|:
Rat 213 ENKL 216
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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