DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and SHOX

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:275 Identity:64/275 - (23%)
Similarity:105/275 - (38%) Gaps:82/275 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 DPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVES-VARSLNKG 235
            |..:..|:||||..|...::                           ::...|:|| :|||...|
Human    13 DQKSKDGNGGGGGGGGKKDS---------------------------ITYREVLESGLARSRELG 50

  Fly   236 VLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKN 300
            ....||               ..::.|.|:..|.:..   ...|::.:...|.|:::.:..    
Human    51 TSDSSL---------------QDITEGGGHCPVHLFK---DHVDNDKEKLKEFGTARVAEG---- 93

  Fly   301 PPQIYPWMKRVHLGTSTVNANGETK----RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 361
               ||. .|.......:.:.:|:||    |.||::|..|..|||:.|....|.....|.|::..|
Human    94 ---IYE-CKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 154

  Fly   362 CLTERQIKIWFQNRRMKWKKE----HK---------MASMNIVPY-HMGPYGHPYHQFD------ 406
            .|:|.::::||||||.|.:|:    ||         :.:..:.|| :||....|:.|..      
Human   155 GLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMPFQQVQAQLQLE 219

  Fly   407 ----IHPSQFAHLSA 417
                .||....||:|
Human   220 GVAHAHPHLHPHLAA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 23/59 (39%)
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 7/47 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 3/18 (17%)
Homeodomain 118..174 CDD:459649 22/55 (40%)
SH3-binding. /evidence=ECO:0000255 242..249
OAR 272..288 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287
Blue background indicates that the domain is not in the aligned region.

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