Protein Alignment Scr and hoxa3a

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_571609.2
• Gene: hoxa3a / 58049
• ZFINID: ZDB-GENE-000823-3
• Length: 410
• Species: Danio rerio
• Alignment Length: 303
• Identity: 95/303 - (31%)
• Similarity: 120/303 - (39%)
• Gaps: 108/303 - (35%)

  Fly   240 SLAAAAAAAGLNNNHSGSGV----SGGPGNV------NVPMHSPGGGDSDSESDSGNEAGSSQNS 294
            ||.:...:|||:.::..|.|    :|....|      ..|..:|.|..|.|   |.|:.   .|.
Zfish    49 SLQSPGISAGLHTSNEMSEVCQQINGTQATVTDTSDNKQPPTAPSGPSSPS---SLNQI---PNI 107

  Fly   295 GNGKKNP----------PQIYPWMKRVHLGT--------STVNANGE--------TKRQRTSYTR 333
            .:..|||          ..|:||||.....|        |..:..|:        :||.||:||.
Zfish   108 DSAAKNPVHVSPTPSTRKHIFPWMKESRQNTKQKSCSIISVESCAGDKSPPGSAASKRARTAYTS 172

  Fly   334 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPY 398
            .|.:||||||||||||.|.||:|:|:.|.||||||||||||||||:||:.|...|
Zfish   173 AQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGLGM---------- 227

  Fly   399 GHPYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGGGSV 463
                     .||..|                     |.|:   :..|.:||
Zfish   228 ---------MPSPGA---------------------QSPH---SPVSLSSG-------------- 245

  Fly   464 GVGGGAGGPGSLANGGSNGSGPNSLFASAASSSQAPDCIKYPQ 506
              |||.||...|       |..:||..|....|.:|.....||
Zfish   246 --GGGGGGSAYL-------SSMHSLVNSVTYDSPSPASYNKPQ 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	41/55 (75%)
hoxa3a	NP_571609.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	79..126		12/52 (23%)
		Antp-type hexapeptide	127..132		3/4 (75%)
		Homeodomain	164..220	CDD:459649	41/55 (75%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	222..249		12/85 (14%)
		DUF4074	346..408	CDD:463833