Protein Alignment Scr and nkx6.2

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001129256.1
• Gene: nkx6.2 / 565782
• ZFINID: ZDB-GENE-070626-1
• Length: 278
• Species: Danio rerio
• Alignment Length: 88
• Identity: 33/88 - (37%)
• Similarity: 50/88 - (56%)
• Gaps: 6/88 - (6%)

  Fly   306 PWM-KRVHLGTST---VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 366
            ||. .||......   ::.:|:.|..|.:::..|...|||.|...:||....|..:|::|.:||.
Zfish   129 PWRDPRVPCAAQANMMLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTES 193

  Fly   367 QIKIWFQNRRMKWKKEH--KMAS 387
            |:|:||||||.||:|.|  :||:
Zfish   194 QVKVWFQNRRTKWRKRHAAEMAT 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	24/55 (44%)
nkx6.2	NP_001129256.1	Homeodomain	150..208	CDD:459649	24/57 (42%)