Protein Alignment Scr and hoxc9

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001017256.1
• Gene: hoxc9 / 550010
• XenbaseID: XB-GENE-482330
• Length: 100
• Species: Xenopus tropicalis
• Alignment Length: 87
• Identity: 48/87 - (55%)
• Similarity: 58/87 - (66%)
• Gaps: 13/87 - (14%)

  Fly   298 KKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 362
            |.||  :..|   :|..:        |:::|..||:||||||||||.||.||||.||.|:|..|.
 Frog    19 KDNP--VANW---IHARS--------TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLN 70

  Fly   363 LTERQIKIWFQNRRMKWKKEHK 384
            |||||:||||||||||.||.:|
 Frog    71 LTERQVKIWFQNRRMKMKKMNK 92

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	39/55 (71%)
hoxc9	NP_001017256.1	Homeodomain	33..81	CDD:459649	32/47 (68%)