Protein Alignment Scr and Hoxb5

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001178854.1
• Gene: Hoxb5 / 497987
• RGDID: 1562292
• Length: 269
• Species: Rattus norvegicus
• Alignment Length: 396
• Identity: 119/396 - (30%)
• Similarity: 162/396 - (40%)
• Gaps: 149/396 - (37%)

  Fly     8 MSSYQFVNSLASCYPQQMNPQQNHPGAGNSSAGGSGGGAGGSGGVVPSGGTNGGQGSAGAATPGA 72
            |||| ||||.:..||...:.|..:.|:|:|.:|
  Rat     1 MSSY-FVNSFSGRYPNGPDYQLLNYGSGSSLSG-------------------------------- 32

  Fly    73 NDYFPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAA 137
             .|...||.:|               .:||       .:|..:.     |...:......|   .
  Rat    33 -SYRDPAAMHT---------------GSYG-------YNYNGMD-----LSVNRSSASSSH---F 66

  Fly   138 AAVAAQQQQQLAQQQHPQQQQQQQQANISCKYAND---PVTPGGSGGGGVSGSNNN------NNS 193
            .||....:...|..|.|    :.:||..||..::.   |.|.|.|.|...|.|:.:      ::|
  Rat    67 GAVGESSRAFPASAQEP----RFRQATSSCSLSSPESLPCTNGDSHGAKPSASSPSDQATPASSS 127

  Fly   194 ANSNNNNSQSLAS-PQDLSTRDISPKLS---PSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNH 254
            ||....:..|.:| |::.:::..||.|:   |..:..|.|
  Rat   128 ANFTEIDEASASSEPEEAASQLSSPSLARAQPEPMATSTA------------------------- 167

  Fly   255 SGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVN 319
                             :|.|                        ..|||:|||:::|:......
  Rat   168 -----------------APEG------------------------QTPQIFPWMRKLHISHDMTG 191

  Fly   320 ANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 384
            .:|  ||.||:|||||||||||||||||||||||||||||||||:|||||||||||||||||::|
  Rat   192 PDG--KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 254

  Fly   385 MASMNI 390
            :.||::
  Rat   255 LKSMSL 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	50/52 (96%)
Hoxb5	NP_001178854.1	PRK07003	<67..>171	CDD:235906	29/149 (19%)
		Homeobox	198..251	CDD:365835	50/52 (96%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	118	1.000	Domainoid score	I5705
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	145	1.000	Inparanoid score	I4339
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm44950
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.820