Protein Alignment Scr and nkx2.2b

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001007783.2
• Gene: nkx2.2b / 493627
• ZFINID: ZDB-GENE-050217-3
• Length: 237
• Species: Danio rerio
• Alignment Length: 190
• Identity: 52/190 - (27%)
• Similarity: 75/190 - (39%)
• Gaps: 46/190 - (24%)

  Fly   250 LNNNHSGSGV--------SGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQ-----------NSG 295
            |.|:.||..|        :...|:|:        .|::.|.|.|..|...:           .|.
Zfish     3 LKNSKSGFTVRDILDLPDTNDEGSVS--------EDTEDEQDEGLNANQKKQHDSSRDALWLGSS 59

  Fly   296 NGKKNP-PQIYPWMKRVHLGT------STVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRR 353
            .|.|.| |...|......|..      .:...:|:.:::|..:::.||.|||:.|...|||:...
Zfish    60 CGHKYPVPSASPEELNPELSADESVDRESSEDSGKKRKRRILFSKTQTFELERRFRQQRYLSAPE 124

  Fly   354 RIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPY----------GHPYH 403
            |..:|..|.||..|:||||||.|.|.|:..  |...:.||.:.|.          |.|.|
Zfish   125 REHLAKLLHLTPTQVKIWFQNHRYKVKRAR--AEKGLDPYLLSPRRVSIPVLVRDGRPCH 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	24/55 (44%)
nkx2.2b	NP_001007783.2	Homeodomain	96..152	CDD:459649	24/55 (44%)