Protein Alignment Scr and hoxa1

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001008017.1
• Gene: hoxa1 / 493379
• XenbaseID: XB-GENE-480737
• Length: 323
• Species: Xenopus tropicalis
• Alignment Length: 237
• Identity: 77/237 - (32%)
• Similarity: 112/237 - (47%)
• Gaps: 32/237 - (13%)

  Fly   181 GGGV---SGSNNNNNSANS---NNNNSQS---LASPQDLSTRDISPKLS--PSSVVESVARSLNK 234
            |.||   |..:::::.|.:   :||...|   .:...:...::.||..|  |.:....|:....:
 Frog    56 GRGVQISSHPHHHHHQAGAFQHHNNLGMSYTHTSCGSNYGMQNFSPGYSHFPINQEADVSAGFPQ 120

  Fly   235 GVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGS---SQN--- 293
            .|..|::|::.    :.::...|.:.|....::   ||.|...:.|.::..|...|   ||.
 Frog   121 SVYSGNIASSV----VQHHQHQSYIEGSAHYIH---HSYGPDQNISVANYNNNVSSLHISQREVC 178

  Fly   294 ---SGNGKKNPPQIYPWMKRVHLGTSTVNAN-----GETKRQRTSYTRYQTLELEKEFHFNRYLT 350
               |......|.|.:.|||.......|..|.     |:....||::|..|..|||||||||:|||
 Frog   179 RSPSSETSPGPAQTFDWMKVKRNPPKTGKAGEYGFAGQPNTARTNFTTKQLTELEKEFHFNKYLT 243

  Fly   351 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVP 392
            |.||:|||.||.|.|.|:||||||||||.||..|...:.|.|
 Frog   244 RARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLPISP 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	37/52 (71%)
hoxa1	NP_001008017.1	Homeobox	221..274	CDD:365835	37/52 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910