DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and NKX3-1

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_006158.2 Gene:NKX3-1 / 4824 HGNCID:7838 Length:234 Species:Homo sapiens


Alignment Length:217 Identity:55/217 - (25%)
Similarity:82/217 - (37%) Gaps:67/217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 STRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGG 275
            |.|...|:..|....|           ||     .:.||..|:...:|          |..:|..
Human    48 SQRQRDPEPEPEPEPE-----------GG-----RSRAGAQNDQLSTG----------PRAAPEE 86

  Fly   276 GDSDSESDSGNEAGS----SQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQT 336
            .::.:|::.....||    |:|:.......||               ......||.|.:::..|.
Human    87 AETLAETEPERHLGSYLLDSENTSGALPRLPQ---------------TPKQPQKRSRAAFSHTQV 136

  Fly   337 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK--------------------K 381
            :|||::|...:||:...|..:|..|.|||.|:||||||||.|.|                    |
Human   137 IELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSSELGDLEKHSSLPALK 201

  Fly   382 EHKMASMNIVP-YHMGPYGHPY 402
            |...:..::|. |:..|| :||
Human   202 EEAFSRASLVSVYNSYPY-YPY 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 27/75 (36%)
NKX3-1NP_006158.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 23/123 (19%)
Homeodomain 125..181 CDD:459649 26/55 (47%)

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