Protein Alignment Scr and Abd-B

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 512
• Identity: 126/512 - (24%)
• Similarity: 172/512 - (33%)
• Gaps: 216/512 - (42%)

  Fly    92 QAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQ--------------------------QQQQQQ 130
            |.|:..|.    |......:...||.|:..|||                          ||||||
  Fly     2 QQHHLQQQ----QQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQ 62

  Fly   131 QQHAHAA---AAVAAQQQQQ------------------------LAQQQH---PQQQQ--QQQQA 163
            ||||..|   ::|..|||||                        ..||||   |||||  ||||.
  Fly    63 QQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQ 127

  Fly   164 NISCKYANDPV--------TPGGSGG-----------GGVSGSNNNNNSANSNNNNSQSLASPQD 209
            ....:.|..||        ||.|...           ..:......|:.|:..::|.|.....|:
  Fly   128 QQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQN 192

  Fly   210 LS-----TRDISP---KLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLN--------------- 251
            .:     |:.::|   .:|||| |.|....:|..:....|...|..||..
  Fly   193 AAVAPGQTQIVAPTTASVSPSS-VSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAH 256

  Fly   252 --------NNHSGSG-------------------------------------------------- 258
                    |.|.|||
  Fly   257 WAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVS 321

  Fly   259 ------VSG-GPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNP----PQIYPWMKRVH 312
                  |.| ...:...|.:|..||.....|::.:.:|:|.....|...|    |.::.|..:|
  Fly   322 AAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQV- 385

  Fly   313 LGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 377
                      ..:::|..|:::|||||||||.||.|:::::|.|:|..|.|||||:|||||||||
  Fly   386 ----------SVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRM 440

  Fly   378 KWKK-------------------EHKMASMNIVPYHMGPY-------GHPYHQFDIH 408
            |.||                   .|..|:..   :|.|.:       ||  |...:|
  Fly   441 KNKKNSQRQANQQNNNNNSSSNHNHAQATQQ---HHSGHHLNLSLNMGH--HAAKMH 492

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	33/55 (60%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	33/55 (60%)