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Protein Alignment Scr and hoxc8a
DIOPT Version :9
Sequence 1: | NP_001368995.1 |
Gene: | Scr / 40833 |
FlyBaseID: | FBgn0003339 |
Length: | 564 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001005771.1 |
Gene: | hoxc8a / 449648 |
ZFINID: | ZDB-GENE-990415-114 |
Length: | 250 |
Species: | Danio rerio |
Alignment Length: | 194 |
Identity: | 76/194 - (39%) |
Similarity: | 97/194 - (50%) |
Gaps: | 51/194 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 226 ESVARSLNKGVLGGSLAAAAAAAGLNN---------NHSGSGVSGGPGNVNVPMHSPGGGDS--- 278
:||||| :..|.| ..|||.|..: :|..:|:| .||....|......||:
Zfish 30 QSVARS-HTLVYG----HGAAAPGFQHPSHHVQDFFHHGTTGIS-NPGYQQNPCALACHGDATKF 88
Fly 279 ------------------------DSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVN 319
|.:|.:....|..|...:...:|..::||| |.|
Zfish 89 YGYEALPRQPLYGTQQEATLAQYPDCKSSNSTNPGEGQGHLSQNSSPSLMFPWM-RPH------- 145
Fly 320 ANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
|.|. :..|.:|:|||||||||||.||.||||:||||::|||.|||||:||||||||||||||:
Zfish 146 APGR-RNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKEN 208
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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