Protein Alignment Scr and hoxc8a

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001005771.1
• Gene: hoxc8a / 449648
• ZFINID: ZDB-GENE-990415-114
• Length: 250
• Species: Danio rerio
• Alignment Length: 194
• Identity: 76/194 - (39%)
• Similarity: 97/194 - (50%)
• Gaps: 51/194 - (26%)

  Fly   226 ESVARSLNKGVLGGSLAAAAAAAGLNN---------NHSGSGVSGGPGNVNVPMHSPGGGDS--- 278
            :||||| :..|.|    ..|||.|..:         :|..:|:| .||....|......||:
Zfish    30 QSVARS-HTLVYG----HGAAAPGFQHPSHHVQDFFHHGTTGIS-NPGYQQNPCALACHGDATKF 88

  Fly   279 ------------------------DSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVN 319
                                    |.:|.:....|..|...:...:|..::||| |.|
Zfish    89 YGYEALPRQPLYGTQQEATLAQYPDCKSSNSTNPGEGQGHLSQNSSPSLMFPWM-RPH------- 145

  Fly   320 ANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
            |.|. :..|.:|:|||||||||||.||.||||:||||::|||.|||||:||||||||||||||:
Zfish   146 APGR-RNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKEN 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	42/55 (76%)
hoxc8a	NP_001005771.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	112..152		12/48 (25%)
		Antp-type hexapeptide. /evidence=ECO:0000255	138..143		3/5 (60%)
		Homeodomain	150..206	CDD:459649	42/55 (76%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..250		2/3 (67%)