Protein Alignment Scr and hoxc8

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001006787.1
• Gene: hoxc8 / 448482
• XenbaseID: XB-GENE-480999
• Length: 242
• Species: Xenopus tropicalis
• Alignment Length: 193
• Identity: 77/193 - (39%)
• Similarity: 95/193 - (49%)
• Gaps: 49/193 - (25%)

  Fly   226 ESVARSLNKGVLGGSLAAAAAAAGLNN---------NH-----SGSGVSGGP------------- 263
            :||:|| :..|.|.|    |.|.|..:         :|     |.||....|
 Frog    30 QSVSRS-HALVYGPS----ATAPGFQHPSHHVQEFFHHGSSSLSNSGFQQNPCALTCHGDASKFY 89

  Fly   264 GNVNVPMHSPGGGDS--------DSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNA 320
            |...:|..|..|...        |.:|.|.......|...|...:|..::||| |.|       |
 Frog    90 GYEALPRQSLYGAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWM-RPH-------A 146

  Fly   321 NGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
            .|. :..|.:|:|||||||||||.||.||||:||||::|||.|||||:||||||||||||||:
 Frog   147 PGR-RSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	42/55 (76%)
hoxc8	NP_001006787.1	Homeodomain	150..206	CDD:459649	42/55 (76%)