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Protein Alignment Scr and hoxc8
DIOPT Version :9
Sequence 1: | NP_001368995.1 |
Gene: | Scr / 40833 |
FlyBaseID: | FBgn0003339 |
Length: | 564 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001006787.1 |
Gene: | hoxc8 / 448482 |
XenbaseID: | XB-GENE-480999 |
Length: | 242 |
Species: | Xenopus tropicalis |
Alignment Length: | 193 |
Identity: | 77/193 - (39%) |
Similarity: | 95/193 - (49%) |
Gaps: | 49/193 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 226 ESVARSLNKGVLGGSLAAAAAAAGLNN---------NH-----SGSGVSGGP------------- 263
:||:|| :..|.|.| |.|.|..: :| |.||....|
Frog 30 QSVSRS-HALVYGPS----ATAPGFQHPSHHVQEFFHHGSSSLSNSGFQQNPCALTCHGDASKFY 89
Fly 264 GNVNVPMHSPGGGDS--------DSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNA 320
|...:|..|..|... |.:|.|.......|...|...:|..::||| |.| |
Frog 90 GYEALPRQSLYGAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWM-RPH-------A 146
Fly 321 NGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
.|. :..|.:|:|||||||||||.||.||||:||||::|||.|||||:||||||||||||||:
Frog 147 PGR-RSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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