Protein Alignment Scr and ro

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 286
• Identity: 76/286 - (26%)
• Similarity: 99/286 - (34%)
• Gaps: 108/286 - (37%)

  Fly   260 SGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGET 324
            :||..|..:|...|.|..||....:|..|..::..                        ...|..
  Fly   151 AGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRR------------------------RKEGRQ 191

  Fly   325 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMN 389
            :||||:::..|||.||.|||.|.|::|.||.|:|..|.|||.||||||||||.|.|:..|.
  Fly   192 RRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKA---- 252

  Fly   390 IVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQ- 453
                          |.|.|...|.                                .|:|:.|.
  Fly   253 --------------QIDQHYRNFV--------------------------------VANGFMSSI 271

  Fly   454 ---------DGGPIGGGSVGVG----GGAGGPGSLANGGSNGSGPNSLFASAASSSQAPDCIKYP 505
                     .||..||.:||||    ..|..|.:|..                .::|..:.|...
  Fly   272 MGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALPK----------------DNTQDANFIDID 320

  Fly   506 QEFXSQVIIRQQHQQQQDNSMDRNQE 531
            .:| .|    ||.:|||.....|.:|
  Fly   321 DQFQRQ----QQQKQQQQQQQQRRRE 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	32/52 (62%)
ro	NP_524521.1	Homeobox	196..247	CDD:278475	31/50 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439772
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.740