Protein Alignment Scr and lbl

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Alignment Length: 376
• Identity: 87/376 - (23%)
• Similarity: 131/376 - (34%)
• Gaps: 128/376 - (34%)

  Fly    68 ATPGANDYFPAAAAYTPN-----LYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQ 127
            |.|.|....||..|....     |.||.|               |....:|.|.|  .||...:|
  Fly    78 AIPNALPGVPAPLALINERLQIPLVPNCP---------------PPAALHTFLSP--ALLHSYEQ 125

  Fly   128 QQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQ---QQQANISCKYANDPVTPGGSGGGGVSGSNN 189
            :           :|...|:||  |:|.|.|.|   |...|.:...:.|             ||:.
  Fly   126 R-----------LAWDYQRQL--QEHFQAQAQLLRQMTLNPAIIASED-------------GSSE 164

  Fly   190 NNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNH 254
            .:..::|:|.:::.               .||:...:...||..
  Fly   165 RSQRSSSSNGSTEC---------------CSPTQAEKVEKRSQE--------------------- 193

  Fly   255 SGSGVSGGPGNVNVPMHSP---GGGDSDSESDSGNEAGSSQNSGN-GKKNPPQIYPWMKRVHLGT 315
                     ..:.||..||   ..|.|.|..|:..:|....::.| .::..|        ..|..
  Fly   194 ---------DRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDP--------ATLNI 241

  Fly   316 STVNANGETKRQ-RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 379
            ....:|.:.||: ||::|..|..||||.|.:.:||:...|.|||..|.|:..|:..||||||.|.
  Fly   242 FATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKL 306

  Fly   380 KKE----------HKMASMNIVP---YHMGPYGHPYHQFDIHPSQFAHLSA 417
            |::          .|:...:..|   :|..|:.|..||      .:||:.:
  Fly   307 KRDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQ------HYAHMQS 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	27/56 (48%)
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	39/133 (29%)
		Homeodomain	252..308	CDD:459649	26/55 (47%)