Protein Alignment Scr and CG18599

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Alignment Length: 426
• Identity: 118/426 - (27%)
• Similarity: 168/426 - (39%)
• Gaps: 129/426 - (30%)

  Fly    26 NPQQNHPGAGNSSAGGSGGGAGGSGGVVPSGGTNGGQGSAG----AATPGANDYFPAAAAYTPNL 86
            ||..:.....|:.|  ||||:||...|...||..||..:.|    ||...|     ||||.
  Fly    11 NPLSHFLALHNTQA--SGGGSGGGSSVAGLGGLGGGIHAHGQPHHAALAAA-----AAAAV---- 64

  Fly    87 YPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQ 151
                  |..|.|::|            |::.|:...|.|||||||||.|             .||
  Fly    65 ------AVSAGQSSY------------QMEHQQQHHQLQQQQQQQQHHH-------------HQQ 98

  Fly   152 QHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDIS 216
            .|...|.....         .|.||........|.|::|::|.|||:|:.:.||:....:|
  Fly    99 LHTHHQDGHHP---------HPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATAT---- 150

  Fly   217 PKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLN------NN------HSGSGVSG-------- 261
               |.:.::|:.|...:..|  |.....||..||.      ||      |..:.:.|
  Fly   151 ---SHAQLIEAAAAHSSLDV--GKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYT 210

  Fly   262 -GPGNVNVPMHSPGGGDS--DSESDSGNEAGSSQNSGNGK------KNP---------------- 301
             .|.| |...::.||.:|  ::.|.|.|.......:|||:      ::|
  Fly   211 SNPNN-NNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGA 274

  Fly   302 -PQIYPWMKRVH-----LGTSTVNANGE-------------TKRQRTSYTRYQTLELEKEFHFNR 347
             |.....::::|     ...:|::...|             .||.||.:|..|...||.||...:
  Fly   275 APSALQSLQQLHQQHHAQQQATLSFQREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQ 339

  Fly   348 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
            |:....|:.:||.|.|||.|:|:||||||:||:|.|
  Fly   340 YMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	28/55 (51%)
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	28/55 (51%)