Protein Alignment Scr and Ubx

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 402
• Identity: 122/402 - (30%)
• Similarity: 148/402 - (36%)
• Gaps: 142/402 - (35%)

  Fly    73 NDYFPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAA 137
            |.||..|:.:..:       .|.|...|.|..|:.|                       |.|.||
  Fly     2 NSYFEQASGFYGH-------PHQATGMAMGSGGHHD-----------------------QTASAA 36

  Fly   138 AAV------------AAQQQQQLAQQQHPQQQQ----------------QQQQANISCKYAN--- 171
            ||.            .|....|...|..|....                :|...||.....|
  Fly    37 AAAYRGFPLSLGMSPYANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKADAVNGYK 101

  Fly   172 DPVTPGGS----------GGGGVSGSN-----NNNNSANSNNNNSQSLASPQDLSTRDISPK-LS 220
            |....|||          ||||..|:.     |..|:||:|..|:.:...|       :.|. .:
  Fly   102 DIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMP-------VRPSACT 159

  Fly   221 PSSVVESVARSLNKGVL---GGSLAAAAAAAGLNNN----HSGSGVSGG--PGNVNVPMHSPGGG 276
            |.|.|.....:.....:   |||.....:.:|.|.|    .||.||:|.  ..|.|..:
  Fly   160 PDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTI------ 218

  Fly   277 DSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMK--------------RVHL----GTST------ 317
                   ||..|.::..|...:.:....||||.              |..|    |.||
  Fly   219 -------SGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRY 276

  Fly   318 ------------VNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 370
                        :..||..:|.|.:||||||||||||||.|.|||||||||:|||||||||||||
  Fly   277 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 341

  Fly   371 WFQNRRMKWKKE 382
            ||||||||.|||
  Fly   342 WFQNRRMKLKKE 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	46/52 (88%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	46/52 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D544833at33208
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.820