Protein Alignment Scr and bcd

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 253
• Identity: 69/253 - (27%)
• Similarity: 98/253 - (38%)
• Gaps: 63/253 - (24%)

  Fly   325 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK---KEHKMA 386
            :|.||::|..|..|||:.|...||||..|..:::..|.|...|:||||:|||.:.|   .:||..
  Fly    98 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQ 162

  Fly   387 SMNIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEP-------YQTAAAA 444
            |...:|...|     ..|.|..|.....||.       |.|...|.|...|       :.|...:
  Fly   163 SYEGMPLSPG-----MKQSDGDPPSLQTLSL-------GGGATPNALTPSPTPSTPTAHMTEHYS 215

  Fly   445 SAASGYQSQDGG--------------PIGGGSVGVGGGAGGPGSL-ANGGSNGSGPNSLFASAAS 494
            .:.:.|.:.:||              |.|||.        ||||. .|||.        |.....
  Fly   216 ESFNAYYNYNGGHNHAQANRHMHMQYPSGGGP--------GPGSTNVNGGQ--------FFQQQQ 264

  Fly   495 SSQAPDCIKY-----PQEFXSQVIIRQQHQQQQDNSMD--RNQERDLKLLLETDCEPD 545
            .......:.:     |.:...|   :||.||||.:..|  :.|....::|::.:.|.|
  Fly   265 VHNHQQQLHHQGNHVPHQMQQQ---QQQAQQQQYHHFDFQQKQASACRVLVKDEPEAD 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	24/55 (44%)
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	20/46 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439773
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.830