DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and NKX1-2

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001139812.1 Gene:NKX1-2 / 390010 HGNCID:31652 Length:310 Species:Homo sapiens


Alignment Length:341 Identity:88/341 - (25%)
Similarity:118/341 - (34%) Gaps:123/341 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ANDPV----TPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVAR 230
            :.|||    ||..:|.|....|....:.|    ...:....|:....|:.:.:|.|     .:||
Human    61 SRDPVRQLETPDAAGPGAGQASPLEGSEA----EEEEDAEDPRRPRLRERAARLLP-----GLAR 116

  Fly   231 SLNKGVLGGSLAAAAAAAGLNNNHSGSGV-SGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNS 294
            |.:        |.|.|.|      ||... .||.|.|..|..|||.                   
Human   117 SPD--------APAGALA------SGEPCEDGGGGPVRSPPGSPGS------------------- 148

  Fly   295 GNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 359
                       |..:|..|..:.    .:.:|.||::|..|.:.||.:|...|||:...|:.:|.
Human   149 -----------PRPRRRRLEPNC----AKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLAL 198

  Fly   360 ALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFS 424
            :|.|||.|:||||||||.||||::..|.                                     
Human   199 SLSLTETQVKIWFQNRRTKWKKQNPGAD------------------------------------- 226

  Fly   425 GTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGGGSVGVGGGAGGPGSLA---NGGSNGSGPN 486
                              .|:...|...|.|...|||..|.||..|.||:.|   ....:.|..|
Human   227 ------------------GAAQVGGGAPQPGAAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAAN 273

  Fly   487 SLFASAAS---SSQAP 499
            .||.||||   ::.||
Human   274 VLFPSAASFPLTAAAP 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 28/55 (51%)
NKX1-2NP_001139812.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..165 33/160 (21%)
Homeodomain 164..220 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..260 18/97 (19%)

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