Protein Alignment Scr and gsb

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Alignment Length: 397
• Identity: 91/397 - (22%)
• Similarity: 139/397 - (35%)
• Gaps: 108/397 - (27%)

  Fly   178 GSGGGGVSGSNNNNNSANSNNNNSQSLASPQ-DLSTRDISPKLSPSSV--------VESVARSLN 233
            ||...||.|.:....:.....:..:.|...| .:.:.:|..||..:.|        |.|::|
  Fly    79 GSIRPGVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISR--- 140

  Fly   234 KGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGK 298
              :|.||       :|...:||..|:.||           |.|...||.:|.::|..|
  Fly   141 --LLRGS-------SGSGTSHSIDGILGG-----------GAGSVGSEDESEDDAEPS------- 178

  Fly   299 KNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
                               |....:.:|.||:::..|...||:.|...:|.....|.|:|.:..|
  Fly   179 -------------------VQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGL 224

  Fly   364 TERQIKIWFQNRRMKWKKEHKMASM-NIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFSGTG 427
            ||.::::||.|||.:.:|:.....: :..|........|.......|:....|.: .:|..||.
  Fly   225 TEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGA- 288

  Fly   428 XRLNQLYQEPYQTAAA----------ASAASGYQSQDGGPIGGGSVGVGGGAGGPGSLAN-GGSN 481
                      |:..||          ||:.||..|....|:...:...|.|:....|... |.||
  Fly   289 ----------YENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGSSN 343

  Fly   482 GSGPN-----------------SLFASAASS-SQAP---DCIKY------PQEFXSQVIIRQQHQ 519
            .:.|:                 |.|||||:| |..|   |...:      |... ...|....||
  Fly   344 ATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNFAGSFFPPASAAGNHISGYHHQ 408

  Fly   520 QQQDNSM 526
            ..|.:||
  Fly   409 VDQKSSM 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	19/55 (35%)
gsb	NP_523863.1	PAX	19..143	CDD:128645	14/68 (21%)
		Homeodomain	186..242	CDD:459649	19/55 (35%)