DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and unpg

DIOPT Version :9

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:480 Identity:125/480 - (26%)
Similarity:171/480 - (35%) Gaps:125/480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QNHPGAGNSSAGGSGGGAGGSGGVVPS--GGTNGGQGSAGAATPGANDYFPAAAAYTPNLYPNTP 91
            |||....:..|||.         .:||  .|....|.....|.|......|...|....|.|..|
  Fly    95 QNHERLTHLIAGGC---------YLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLP 150

  Fly    92 QAHYA-----NQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQ 151
            .....     |.||.|       |..|.|..:||     .:...|.:.|:.:..|..|....|.:
  Fly   151 HPLDTRFLPFNPAAAG-------VAPTDLSYRRL-----AELMNQDYVHSLSVHARLQHMAAAGR 203

  Fly   152 QHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDIS 216
            .|      :.|||.......:|..|........|||::....|.....:.....|....|  |||
  Fly   204 MH------EDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCS--DIS 260

  Fly   217 PKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSE 281
            ..:||.:....:.:|.|...........:...|..:.|.|.|:              ||.||   
  Fly   261 LTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGM--------------GGKDS--- 308

  Fly   282 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFN 346
              .||  |||.||                            :::|:||::|..|.||||:|||..
  Fly   309 --QGN--GSSSNS----------------------------KSRRRRTAFTSEQLLELEREFHAK 341

  Fly   347 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGH--------PYH 403
            :||:...|.:||.:|.|:|.|:||||||||.|||:    ....:..:.:|..|.        |  
  Fly   342 KYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR----VKAGLTSHGLGRNGTTSGTKIVVP-- 400

  Fly   404 QFDIHPSQFAHLS---AXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQ---------SQDGG 456
             ..:|.::||..|   . :....||.. .|.:        ..:|.|..|::         |..||
  Fly   401 -IPVHVNRFAVRSQHQQLEKMCLSGPKPDLRK--------KLSAEAIGGFEKFSGSTNASSPSGG 456

  Fly   457 PIG-----GGSVGVGGGAGGPGSLA 476
            |:|     |..||||.|...|.|||
  Fly   457 PVGLGVGVGVGVGVGLGVSTPLSLA 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeobox 328..381 CDD:395001 30/52 (58%)
unpgNP_477146.1 Homeobox 324..375 CDD:278475 28/50 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
43.810

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