DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and pnx

DIOPT Version :9

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_840087.1 Gene:pnx / 352939 ZFINID:ZDB-GENE-030328-42 Length:182 Species:Danio rerio


Alignment Length:157 Identity:49/157 - (31%)
Similarity:69/157 - (43%) Gaps:30/157 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 GDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANG---ETKRQRTSYTRYQTL 337
            |..::...|.|.......|...:.:.|.|             .||:.   ::||.||::|..|..
Zfish    29 GTRETREISNNRESPKTTSPTQEPSAPNI-------------ANASAAKVKSKRIRTAFTLDQLR 80

  Fly   338 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE----------H---KMASMN 389
            .||:.|..:.||:...|..||.||.|:|.|:||||||||.|||||          |   ...:.|
Zfish    81 ILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWKKELDGHGGEEQSHCAPTALTQN 145

  Fly   390 IVPYHMGPYGHPYHQFDIHPSQFAHLS 416
            .:.|.: |..|..|....:|.|..:|:
Zfish   146 PIMYAL-PGHHANHHVHYYPQQTHYLN 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeobox 328..381 CDD:395001 27/52 (52%)
pnxNP_840087.1 Important for interaction with tle3a. /evidence=ECO:0000269|PubMed:12642490 1..34 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..63 8/46 (17%)
Homeobox 71..123 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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