DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and HOXB8

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_076921.1 Gene:HOXB8 / 3218 HGNCID:5119 Length:243 Species:Homo sapiens


Alignment Length:228 Identity:84/228 - (36%)
Similarity:104/228 - (45%) Gaps:65/228 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 NSANSNNNNSQSL-------ASPQDLSTRDISPKL--SPSSVVESVARSLNKGVLGGSL------ 241
            ||..|.....:||       ...|||..|   |.:  .|||              |||.      
Human     7 NSLFSKYKTGESLRPNYYDCGFAQDLGGR---PTVVYGPSS--------------GGSFQHPSQI 54

  Fly   242 ------AAAAAAAGLNNNHSGSGVSGGPGNV--NVPMHSP---GGGDSD----------SESDSG 285
                  .::.:.|....|.......|.|||.  ..|:...   |..|.|          :.|..|
Human    55 QEFYHGPSSLSTAPYQQNPCAVACHGDPGNFYGYDPLQRQSLFGAQDPDLVQYADCKLAAASGLG 119

  Fly   286 NEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLT 350
            .||..|:.|    .:|.|::|||:        ..|....:|.|.:|:|||||||||||.||.|||
Human   120 EEAEGSEQS----PSPTQLFPWMR--------PQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLT 172

  Fly   351 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
            |:||||::|||.|||||:||||||||||||||:
Human   173 RKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 43/55 (78%)
HOXB8NP_076921.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeodomain 147..203 CDD:459649 43/55 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..243 2/3 (67%)

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