DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and HOXA6

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:134 Identity:76/134 - (56%)
Similarity:95/134 - (70%) Gaps:11/134 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 SGSGVSGGPGNVNVPMH-SPGGGDSDSESDSGNEAGSS-QNSGNGKKNPPQIYPWMKRVHLGTST 317
            ||||...|||:.   :| ||   :...:.||.:..|.: .:.|..:|....:||||:|::.....
Human    91 SGSGKQRGPGDY---LHFSP---EQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGA 149

  Fly   318 V-NANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 381
            | .::|  :|.|.:||||||||||||||||||||||||||||:||||||||||||||||||||||
Human   150 VYGSHG--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 212

  Fly   382 EHKM 385
            |:|:
Human   213 ENKL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 50/55 (91%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 13/41 (32%)
Antp-type hexapeptide 136..141 3/4 (75%)
Homeodomain 156..212 CDD:459649 50/55 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 1/3 (33%)

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