Protein Alignment Scr and Hoxc5

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001101586.1
• Gene: Hoxc5 / 315341
• RGDID: 1307584
• Length: 222
• Species: Rattus norvegicus
• Alignment Length: 223
• Identity: 93/223 - (41%)
• Similarity: 116/223 - (52%)
• Gaps: 49/223 - (21%)

  Fly   190 NNNSANSNNNNSQSLASPQDLSTRDIS---PKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLN 251
            |..:..:..:.|:..||.......|:|   |..:||:.:..|..:.|........|.:||||
  Rat    20 NMQTCGNYGSASEVQASRYCYGGLDLSITFPPPAPSNSLHGVDMAANPRAHPDRPACSAAAA--- 81

  Fly   252 NNHSGSGVSGGPGN---------VNVPMHS-------------PGGGDSDSESDSGNEAGSSQNS 294
                       ||:         :|..|:|             ..|...:.::.:|..||.||..
  Rat    82 -----------PGHALGRDEAAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPP 135

  Fly   295 GNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 359
            .     ||||||||.::|:...|     :.||.|||||||||||||||||||||||||||||||:
  Rat   136 A-----PPQIYPWMTKLHMSHET-----DGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAN 190

  Fly   360 ALCLTERQIKIWFQNRRMKWKKEHKMAS 387
            .|||.|||||||||||||||||:.||.|
  Rat   191 NLCLNERQIKIWFQNRRMKWKKDSKMKS 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	49/52 (94%)
Hoxc5	NP_001101586.1	COG5373	65..>142	CDD:227665	21/95 (22%)
		Homeobox	158..212	CDD:395001	49/53 (92%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm44950
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.770