DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Scr and dlx4a

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_571375.1 Gene:dlx4a / 30561 ZFINID:ZDB-GENE-980526-73 Length:250 Species:Danio rerio


Alignment Length:235 Identity:60/235 - (25%)
Similarity:84/235 - (35%) Gaps:75/235 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 GLNNN-HSGSGVSGGPG----------NVNVPMHSPGG---------------GDSDSESDSGNE 287
            ||:.. ||....:..||          :.:...|.||.               .|:|||..|..|
Zfish    46 GLHQGAHSQYDAAFSPGAASYSRPLAYHYSTAHHHPGAYLPYQHNSAVGYSRVEDADSEKQSSIE 110

  Fly   288 AGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRR 352
            :|..:.:|.|||                        .::.||.|:..|...|.:.|...:||...
Zfish   111 SGEIRLNGKGKK------------------------IRKPRTIYSSLQLQALNQRFQQTQYLALP 151

  Fly   353 RRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPYHQFDIHPSQFAHLSA 417
            .|.::|..|.||:.|:||||||:|.|:||..|..|       .||.|.             ||.|
Zfish   152 ERADLAAKLGLTQTQVKIWFQNKRSKYKKIMKHGS-------SGPEGE-------------HLQA 196

  Fly   418 XDAWHFSGT--GXRLNQLYQEPYQTAAAASAASGYQSQDG 455
             .|   ||.  . .:..|:.....:..|...:.||.:..|
Zfish   197 ASA---SGAPCSPGMPPLWDVSMPSKGAPIHSGGYMNSFG 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 22/55 (40%)
dlx4aNP_571375.1 Homeodomain 124..180 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..202 10/42 (24%)

Return to query results.
Submit another query.