Protein Alignment Scr and hoxa13b

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_571269.2
• Gene: hoxa13b / 30438
• ZFINID: ZDB-GENE-980526-365
• Length: 289
• Species: Danio rerio
• Alignment Length: 257
• Identity: 67/257 - (26%)
• Similarity: 102/257 - (39%)
• Gaps: 65/257 - (25%)

  Fly   184 VSGSNNNNNSANSNNNNSQSLASPQDL--STRDISPKL------------SPSSVVESV-ARSLN 233
            :.|....|.:||...|   .:|.|..|  ||...|.::            ||.|.|::. :.||.
Zfish    30 MEGFVGGNFAANQCRN---LIAHPSTLAPSTTYTSSEVPVSGMGEPVKQCSPCSAVQNTPSASLP 91

  Fly   234 KGVLGGSLAAAAAAAG-----------LNNNHSG-------------SGVSGG-----PGNVNVP 269
            .|..|||.........           ::.:.||             .|.|.|     |..::||
Zfish    92 YGYFGGSYYPCRMPKSCTQPTTYGEKYMDTSVSGEEFPSRAKEFAFYQGYSSGPYQPVPSYLDVP 156

  Fly   270 MHSPGGGDSDSESDSGNEAGSSQNSG--NGKKNPPQIY-P---------WMKRVH---LGTSTVN 319
            :.......|:...:|.....:.|...  ||..:|  :| |         |...:.   .||...:
Zfish   157 VVPALSAPSEPRHESLLPVETYQPWAITNGWSSP--VYCPKDQTQSSTLWKSSIQDTVSGTDGAS 219

  Fly   320 ANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 381
            .. ..:::|..||:.|..|||:|:..|:::|:.:|..|:....|||||:.|||||||:|.||
Zfish   220 VR-RGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAHTNLTERQVTIWFQNRRVKEKK 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	25/55 (45%)
hoxa13b	NP_571269.2	HoxA13_N	27..131	CDD:463521	23/103 (22%)
		Homeodomain	224..280	CDD:459649	25/55 (45%)