Protein Alignment Scr and Hoxb1

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_220896.4
• Gene: Hoxb1 / 303491
• RGDID: 1310298
• Length: 297
• Species: Rattus norvegicus
• Alignment Length: 235
• Identity: 77/235 - (32%)
• Similarity: 101/235 - (42%)
• Gaps: 22/235 - (9%)

  Fly   181 GGGVSGSNNNNNSANSNNNNSQSL------ASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGG 239
            |||:..|....||.........||      ::|...:....:|...||... |:.:|...|....
  Rat    46 GGGLPSSALQQNSGYPVQQPPSSLGVSFPSSAPSGYAPAACNPSYGPSQYY-SMGQSEGDGGYFH 109

  Fly   240 SLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQI 304
            ..:..|...||.:::...||..||   ..|...|.|.:..|...|..:..|.....:....|..:
  Rat   110 PSSYGAQLGGLPDSYGAGGVGSGP---YPPPQPPYGTEQTSNFASAYDLLSEDKESSCSSEPSSL 171

  Fly   305 ----YPWMKRVHLGTSTVNAN----GETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 361
                :.|||.......|...:    |.....||::|..|..|||||||||:||:|.||:|||..|
  Rat   172 TARTFDWMKVKRNPPKTAKVSELGLGTPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATL 236

  Fly   362 CLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHP 401
            .|.|.|:||||||||||.||..:....  ||  .||.|.|
  Rat   237 ELNETQVKIWFQNRRMKQKKREREGGR--VP--AGPPGCP 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	35/52 (67%)
Hoxb1	XP_220896.4	Homeobox	203..255	CDD:278475	35/51 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810