Protein Alignment Scr and Dlx4

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001100510.1
• Gene: Dlx4 / 303469
• RGDID: 1308744
• Length: 238
• Species: Rattus norvegicus
• Alignment Length: 234
• Identity: 60/234 - (25%)
• Similarity: 93/234 - (39%)
• Gaps: 30/234 - (12%)

  Fly   217 PKLSPSSVV-------ESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPG 274
            |.|.||:||       .||..:...|:..|:.|:...:......|..|....||.       :||
  Rat     9 PGLGPSNVVFPDLAPASSVVAAYQLGLSPGTAASPDLSFSQTYGHLLSYSYPGPA-------TPG 66

  Fly   275 GGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLG--TSTVNANGETKRQRTSYTRYQTL 337
            .....|:..|   |..|:......::|.::....:::.|.  .|..:...:.::.||.|:..|..
  Rat    67 DSYLSSQQQS---AAPSRPFHQPTEHPQELEAESEKLALSLEPSQPSLTRKLRKPRTIYSSLQLQ 128

  Fly   338 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPY 402
            .|.:.|...:||....|.::|..|.||:.|:||||||:|.|:||..|.:|..:.....   |.|
  Rat   129 HLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQSSGELEEDFS---GRP- 189

  Fly   403 HQFDIHPSQFAH-LSAXDAWHFSGTGXRLNQLYQEPYQT 440
                  ||...| |:....|.....|......|...:.|
  Rat   190 ------PSLSPHSLTLPSIWDLPKAGTLPTSGYDNSFGT 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	22/55 (40%)
Dlx4	NP_001100510.1	Homeodomain	116..172	CDD:459649	22/55 (40%)