Protein Alignment Scr and hoxb8a

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: XP_005171620.1
• Gene: hoxb8a / 30343
• ZFINID: ZDB-GENE-990415-108
• Length: 246
• Species: Danio rerio
• Alignment Length: 160
• Identity: 68/160 - (42%)
• Similarity: 90/160 - (56%)
• Gaps: 42/160 - (26%)

  Fly   253 NHSGSGVSGGPGNVN---VPMH-SPGG-------------GDSDSE----SDS-------GNEAG 289
            :|..|.:|..|...:   |..| .||.             |..|::    ||.       |:|..
Zfish    59 HHGASTLSAAPYQQSPCAVTCHGEPGNFYGYDALQRQTLFGAQDADLVQYSDCKLATGGIGDETD 123

  Fly   290 SSQNSGNGKKNPPQIYPWMK-RVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRR 353
            :::.|    .:|.|::|||: :|..|         .:|.|.:|:|||||||||||.||.||||:|
Zfish   124 NTEQS----PSPTQLFPWMRPQVAAG---------RRRGRQTYSRYQTLELEKEFLFNPYLTRKR 175

  Fly   354 RIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
            |||::|||.|||||:||||||||||||||:
Zfish   176 RIEVSHALGLTERQVKIWFQNRRMKWKKEN 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	43/55 (78%)
hoxb8a	XP_005171620.1	Homeodomain	147..203	CDD:459649	43/55 (78%)