Protein Alignment Scr and hoxd4a

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Alignment Length: 147
• Identity: 78/147 - (53%)
• Similarity: 93/147 - (63%)
• Gaps: 15/147 - (10%)

  Fly   254 HSGSGVSGGP----GNVNVPMHSPGGGDSDSE-----SDSGNEAGSSQ-----NSGNGKKNPPQI 304
            :|.|.|.|..    |:|.....:|....:.:|     ..||:..|..|     .:|...|.|..:
Zfish    81 YSCSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTGGQQQNTKTQNGIPTKQPAVV 145

  Fly   305 YPWMKRVHLGTSTVNANG-ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 368
            |||||:||:.|...:..| |.||.||:|||.|.|||||||||||||||||||||||.|||:||||
Zfish   146 YPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQI 210

  Fly   369 KIWFQNRRMKWKKEHKM 385
            |||||||||||||:||:
Zfish   211 KIWFQNRRMKWKKDHKL 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	47/52 (90%)
hoxd4a	NP_001119917.1	Homeobox	169..222	CDD:278475	46/52 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45771
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	6	5.910