Protein Alignment Scr and ind

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 347
• Identity: 105/347 - (30%)
• Similarity: 141/347 - (40%)
• Gaps: 109/347 - (31%)

  Fly    57 GTNGGQGSAGAATPGANDYFPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLL 121
            |:.||..:|.||.        ||||    :.|:.|...|  .|:|.|         :.|....:.
  Fly    25 GSPGGSPTAAAAV--------AAAA----MLPSIPMLPY--PASYVG---------SYLFSLGIQ 66

  Fly   122 LQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHP------------------QQQQQQQQANISCK 168
            .||||||||||||.||||.||   ...|.||||                  .:::....:|....
  Fly    67 QQQQQQQQQQQHAAAAAAAAA---AAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGC 128

  Fly   169 YANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDI---SPKLSPSSVVESVAR 230
            |.:.|:                     |.|.|||.|....:|....:   .|...|.|...|.:
  Fly   129 YPSPPL---------------------SANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPS- 171

  Fly   231 SLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSG 295
                       |:::|:....||                ...|.|.....||.....:...:|..
  Fly   172 -----------ASSSASLDYTNN----------------FDEPQGKRFKHESSCSPNSSPLKNHS 209

  Fly   296 NGKKNPPQIYPWMKRVHLGTSTVNANGE-TKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 359
            :|  .|.:|.|          .:|...: :||.||::|..|.||||:||..|.||:|.||||||:
  Fly   210 SG--GPVEITP----------LINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIAN 262

  Fly   360 ALCLTERQIKIWFQNRRMKWKK 381
            .|.|:|:|:||||||||:|.||
  Fly   263 RLRLSEKQVKIWFQNRRVKQKK 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	33/52 (63%)
ind	NP_996087.2	Homeobox	231..283	CDD:278475	33/51 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439783
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.740