DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and Dlx5

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_037075.1 Gene:Dlx5 / 25431 RGDID:2506 Length:289 Species:Rattus norvegicus


Alignment Length:349 Identity:78/349 - (22%)
Similarity:121/349 - (34%) Gaps:100/349 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 AQQQHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTR 213
            |...||.|:              .|..|              .:||..::..|.:.|:|...   
  Rat    25 AAMHHPSQE--------------SPTLP--------------ESSATDSDYYSPAGAAPHGY--- 58

  Fly   214 DISPKLSPSSVVESVARSLNK-----GVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSP 273
                 .||:|.  |..::||.     ..:.||.|...|.|..:..::.            |.|..
  Rat    59 -----CSPTSA--SYRKALNPYQYQYHSVNGSAAGYPAKAYADYGYAS------------PYHQY 104

  Fly   274 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETK---RQRTSYTRYQ 335
            ||        :.|...|:.:....:...|::     |:        .||:.|   :.||.|:.:|
  Rat   105 GG--------AYNRVPSATSQPEKEVAEPEV-----RM--------VNGKPKKVRKPRTIYSSFQ 148

  Fly   336 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGH 400
            ...|::.|...:||....|.|:|.:|.||:.|:||||||:|.|.||..|...|           .
  Rat   149 LAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEM-----------P 202

  Fly   401 PYHQFDIHPSQFAHLSAXD-----AWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGG 460
            |.|.    ||....::...     .|...|:...|:. :...:.|.:..|.||.|..........
  Rat   203 PEHS----PSSSDPMACNSPQSPAVWEPQGSSRSLSH-HPHAHPTTSNQSPASSYLENSASWYPS 262

  Fly   461 GSVGVGGGAGGPGSLANGGSNGSG 484
            .:..:......||||.:..:..||
  Rat   263 AASSINSHLPPPGSLQHPLALASG 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 24/58 (41%)
Dlx5NP_037075.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 8/51 (16%)
DLL_N 32..118 CDD:463567 25/143 (17%)
Homeodomain 138..194 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..253 12/70 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..289 6/17 (35%)

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