Protein Alignment Scr and Gbx1

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001258382.1
• Gene: Gbx1 / 246149
• RGDID: 621864
• Length: 425
• Species: Rattus norvegicus
• Alignment Length: 458
• Identity: 112/458 - (24%)
• Similarity: 163/458 - (35%)
• Gaps: 118/458 - (25%)

  Fly     2 DPDCFAMSSYQFVNSLASCYPQQMNPQQNHPGA--GNSSAGGSGGGAGGSGGVVPSGGTNGGQGS 64
            :|.|...:..:::...|     :..|..:.|||  |..||.....|.|..||   |||:.||.|:
  Rat    26 EPHCAEPAPRRYLGPRA-----RSEPCVSAPGARRGPGSAMQRAAGGGAPGG---SGGSGGGPGT 82

  Fly    65 A-------GAATPGANDY----FPAAAAYTP--------------NLYPNTPQAHYANQ-----A 99
            |       |...|.:...    :|....|.|              .|.|..|.|.:|.:     .
  Rat    83 AFSIDSLIGPPPPRSGHLLYTGYPMFMPYRPLVLPQALAPAPLPAGLPPLAPLASFAGRLSNTFC 147

  Fly   100 AYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQAN 164
            |..||..|.||..|...|.............:..|.||||.|:...:
  Rat   148 AGLGQAVPSMVALTTALPSFAEPPDAYYGPPELAAAAAAAAASTVSR------------------ 194

  Fly   165 ISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVA 229
                  ::|..|.....|.:..              .:.|.:.:.::.....|...|....|:..
  Rat   195 ------SNPEPPARRTDGALDA--------------DELLPAREKVTEPPPPPPPPPPHFSETFP 239

  Fly   230 RSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGS---S 291
                      ||.|           .|...|.....:..|...|.|.:.:.|...|:...|   |
  Rat   240 ----------SLPA-----------EGKVYSSDEEKLEPPAGEPAGSEPEEEGSGGDSEDSFLDS 283

  Fly   292 QNSGNGKKNPPQIYPWMK---------RVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNR 347
            ...|.|....|:  |.:|         ...:.|......|:::|:||::|..|.||||||||..:
  Rat   284 SAGGPGALLGPK--PKLKGSLGTGAEEGTPVATGVTTPGGKSRRRRTAFTSEQLLELEKEFHCKK 346

  Fly   348 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHP--YHQFDIHPS 410
            ||:...|.:|||||.|:|.|:||||||||.|||   ::.:.|:......|..:|  .....:|.:
  Rat   347 YLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK---RIKAGNVSSRSGEPVRNPKIVVPIPVHVN 408

  Fly   411 QFA 413
            :||
  Rat   409 RFA 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	33/52 (63%)
Gbx1	NP_001258382.1	Homeobox	326..379	CDD:278475	32/52 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810