DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and Tlx2

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_033418.1 Gene:Tlx2 / 21909 MGIID:1350935 Length:284 Species:Mus musculus


Alignment Length:250 Identity:66/250 - (26%)
Similarity:92/250 - (36%) Gaps:102/250 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 PVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVL 237
            |..|||..|.|.||.::..::|.|:..:..|..:|                              
Mouse    28 PEPPGGGLGPGQSGQSHGESAAFSSGFHGASGYAP------------------------------ 62

  Fly   238 GGSLAAAAAAAGLNNNHSGSGVSGGPGNV-NVPMHSP-------------------GGGDSDSES 282
            .||||:..         .||||  |||.| .||.|.|                   ||       
Mouse    63 AGSLASLP---------RGSGV--GPGGVIRVPAHRPLPVPPPSGAAPAVPGPSGLGG------- 109

  Fly   283 DSGNEAGSSQNSGNGKKNPPQIYPWM--------KRVHLGTSTVNAN------------GETKRQ 327
             :|..||.:             :|||        .|:....|..:..            .:.|:.
Mouse   110 -AGGLAGLT-------------FPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKP 160

  Fly   328 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 382
            |||::|.|.||||:.|...:||....|..:|.||.:|:.|:|.||||||.||:::
Mouse   161 RTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQ 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 28/55 (51%)
Tlx2NP_033418.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..52 9/23 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..104 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..166 4/25 (16%)
Homeodomain 158..214 CDD:459649 28/55 (51%)

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