Protein Alignment Scr and ceh-58

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_496234.3
• Gene: ceh-58 / 182371
• WormBaseID: WBGene00007417
• Length: 327
• Species: Caenorhabditis elegans
• Alignment Length: 233
• Identity: 61/233 - (26%)
• Similarity: 90/233 - (38%)
• Gaps: 65/233 - (27%)

  Fly   202 QSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVL---GGSLAAAAAAAGLNNNH----SGSGV 259
            ||:|...|      :|::..|.|||.|.......:|   .|::.....||..|.||    :|||.
 Worm   115 QSIAEEID------TPEIKKSRVVEPVKVKTETIILDDDDGNVLDTVLAALQNGNHEMQFTGSGG 173

  Fly   260 SGGPGNVNVPMHSPGGGDSDSESDSGN--------------------------EAGSSQNSG--- 295
            |...|..|    |....|.|.| |.|.                          ::..|:|:|
 Worm   174 SSDDGASN----SSNIYDVDDE-DYGTSQWNPDFLTNFITSQPNIFSVTGQNIKSSPSKNAGQTP 233

  Fly   296 NGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHF--NRYLTRRRRIEIA 358
            |||:..|.:             :..||:|:|.|..|:..:...|||.:..  |.....|:|..:.
 Worm   234 NGKRQVPPM-------------LTVNGKTRRGRIVYSTQELNILEKYYEEDPNACADPRKRETMC 285

  Fly   359 HALCLTERQIKIWFQNRRMKWK---KEHKMASMNIVPY 393
            ..|.:...::|:||||||.|.|   :|....:.|.:.|
 Worm   286 KTLSIDYHRLKVWFQNRRRKDKVRSQEEAATTFNGLDY 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	19/60 (32%)
ceh-58	NP_496234.3	Homeodomain	250..307	CDD:459649	18/56 (32%)