Protein Alignment Scr and php-3

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_499573.1
• Gene: php-3 / 176640
• WormBaseID: WBGene00004024
• Length: 275
• Species: Caenorhabditis elegans
• Alignment Length: 267
• Identity: 81/267 - (30%)
• Similarity: 118/267 - (44%)
• Gaps: 61/267 - (22%)

  Fly   134 AHAAAAVAAQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNN--NNNSANS 196
            |..::|.||..|......:..|.||....::            |.|.|...|.|||  ...:.|.
 Worm    44 ATTSSAAAAAMQHNFWSTRAAQLQQSVSGSS------------GVSSGSSSSASNNLSRTQADNH 96

  Fly   197 NNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSG 261
            :...|.:.:|||      ::|  .|:|              .|....||||||:...::|.
 Worm    97 SERGSDTASSPQ------VAP--LPTS--------------SGMSMPAAAAAGMYPFNAGR---- 135

  Fly   262 GPGNVNVPMHSPGGGDSDSESDSGNE-----------AGSSQNSGNGKKNPPQIYPWMKRVHLGT 315
            .|...|:.::.....|..|.|.:.:.           |..|..|.:|..|......|       |
 Worm   136 FPTEFNMMVNQSMYNDFYSNSLAASSWPYSYPQQYPFANYSMPSLDGNLNDGGQLEW-------T 193

  Fly   316 STVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 380
            |:.:|   .:::|..||:.|||||||||.:|.|:::::|.|:|..|.|||||:||||||||||.|
 Worm   194 SSSHA---MRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDK 255

  Fly   381 KEHKMAS 387
            |:.:..|
 Worm   256 KQKQRTS 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	33/55 (60%)
php-3	NP_499573.1	Homeodomain	200..256	CDD:459649	33/55 (60%)