Protein Alignment Scr and lin-39

DIOPT Version :9

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 247
• Identity: 91/247 - (36%)
• Similarity: 140/247 - (56%)
• Gaps: 41/247 - (16%)

  Fly   187 SNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLN 251
            |:::::|::|:::::.|:.:....|:.::|..:....:..|.|.|.:    .||.....:::.:.
 Worm    20 SSSSSSSSSSSSSSTSSVGASGIPSSSELSSTIGYDPMTASAALSAH----FGSYYDPTSSSQIA 80

  Fly   252 NNHSGSGVSGGPG-----------NVNVP------MHSPGGGDSDSESD----SGNEAGSSQNSG 295
            :..:.|...|||.           |.:|.      .|..|..|.|.:.|    ||::....:|||
 Worm    81 SYFASSQGLGGPQYPILGDQSLCYNPSVTSTHHDWKHLEGDDDDDKDDDKKGISGDDDDMDKNSG 145

  Fly   296 NGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 360
            ..      :||||.|||  ::|..:.|| |||||:|||.|.||||||||.::||||:||||:||:
 Worm   146 GA------VYPWMTRVH--STTGGSRGE-KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHS 201

  Fly   361 LCLTERQIKIWFQNRRMKWKKEHKMASMN--IVPY----HMGPYGHP-YHQF 405
            |.|||||:||||||||||.|||:|...|.  ::|:    ..||:..| ::||
 Worm   202 LMLTERQVKIWFQNRRMKHKKENKDKPMTPPMMPFGANLPFGPFRFPLFNQF 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	40/52 (77%)
lin-39	NP_001021164.1	Homeobox	169..221	CDD:278475	40/51 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	101	1.000	Domainoid score	I4346
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	131	1.000	Inparanoid score	I3191
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm14162
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR45771
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4748
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	9.990