DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scr and Meox2

DIOPT Version :10

Sequence 1:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_032610.1 Gene:Meox2 / 17286 MGIID:103219 Length:303 Species:Mus musculus


Alignment Length:309 Identity:79/309 - (25%)
Similarity:109/309 - (35%) Gaps:106/309 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HYANQAAYGGQGNPDMVDYTQL-------------QPQRLLLQQQQQQQQQQHAHAAAAVAAQQQ 145
            |..:|::....|..|.:.|.:|             ..:.:...|..:.....|.|          
Mouse    20 HPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMFASQHHRGHHHHHHH---------- 74

  Fly   146 QQLAQQQHPQQQQQQQQANISCKYANDPVTPG--------GSGGGGVSGSNNNNNSANSNNNNSQ 202
               ....|.|||.|..|:|......:.|.:..        .|||                     
Mouse    75 ---HHHHHQQQQHQALQSNWHLPQMSSPPSAARHSLCLQPDSGG--------------------- 115

  Fly   203 SLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVN 267
                |.:|.:   ||.:..|          |...||.|....||.|              ||:..
Mouse   116 ----PPELGS---SPPVLCS----------NSSSLGSSTPTGAACA--------------PGDYG 149

  Fly   268 VPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYT 332
            ....||...:..|.|...:::..|| .||.|.                   ..|.:.:::||::|
Mouse   150 RQALSPADVEKRSGSKRKSDSSDSQ-EGNYKS-------------------EVNSKPRKERTAFT 194

  Fly   333 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 381
            :.|..|||.||..:.||||.||.|||..|.|||||:|:||||||||||:
Mouse   195 KEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 34/55 (62%)
Meox2NP_032610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..191 38/212 (18%)
Homeodomain 187..243 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..303
Blue background indicates that the domain is not in the aligned region.

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