Protein Alignment Scr and Hoxd9

DIOPT Version :10

• Sequence 1: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_038583.1
• Gene: Hoxd9 / 15438
• MGIID: 96210
• Length: 339
• Species: Mus musculus
• Alignment Length: 375
• Identity: 106/375 - (28%)
• Similarity: 138/375 - (36%)
• Gaps: 144/375 - (38%)

  Fly    17 LASCYPQQ-----MNPQQNHPGAGNSSAGGSGGGAGGSGGVVPSGGTNGGQGSAGAATPGANDYF 76
            ||:..|.:     |.|....|| |....||||||.||..|.|||
Mouse    95 LAAAEPGRYVRSWMEPLPGFPG-GAGGGGGSGGGGGGGPGPVPS--------------------- 137

  Fly    77 PAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVA 141
                       |..|    ||...||            ::|:               ..||.|.|
Mouse   138 -----------PGGP----ANGRHYG------------IKPE---------------TGAAPAPA 160

  Fly   142 AQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLAS 206
            |                                         .|.|::::.|::|::..::..|:
Mouse   161 A-----------------------------------------ASTSSSSSTSSSSSSKRTECSAA 184

  Fly   207 PQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMH 271
                  |:......|.....|..|.           .||||.|   |..|.|:..|||.|
Mouse   185 ------RESQGSGGPEFPCNSFLRD-----------KAAAATG---NGPGVGIGTGPGAV----- 224

  Fly   272 SPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVN--ANGETKRQRTSYTRY 334
              |..:..:.||..:...|.:..   :|.|||  |..:::.......|  ....|:::|..||:|
Mouse   225 --GSSEPSACSDHPSPGCSLKEE---EKQPPQ--PPQQQLDPNNPAANWIHARSTRKKRCPYTKY 282

  Fly   335 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 384
            |||||||||.||.||||.||.|:|..|.|||||:||||||||||.||..|
Mouse   283 QTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSK 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	39/55 (71%)
Hoxd9	NP_038583.1	Hox9_act	1..>153	CDD:461369	27/121 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	114..198		34/194 (18%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	211..263		16/63 (25%)
		Homeodomain	273..324	CDD:459649	35/50 (70%)